.travis.yml

os:
  - linux
dist: bionic
sudo: required

language: python

cache: pip

python:
  - "3.6"
  - "3.7"

services:
  - docker

env:
  - DATABASE_URI=localhost

before_install:
  - sudo apt-get update
  - if [[ "$TRAVIS_PYTHON_VERSION" == "2.7" ]]; then
    wget https://repo.continuum.io/miniconda/Miniconda2-latest-Linux-x86_64.sh -O miniconda.sh;
    else
    wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh;
    fi
  - bash miniconda.sh -b -p $HOME/miniconda
  - export PATH="$HOME/miniconda/bin:$PATH"
  - hash -r
  - conda config --set always_yes yes --set changeps1 no
  - conda update -q conda
  - conda config --get channels
  - conda config --add channels conda-forge
  - conda config --add channels bioconda
  - conda config --add channels https://conda.anaconda.org/thoba
  - conda info -a
  - python setup.py install

before_script:
  - conda install pip conda-build anaconda-client
  - pip install -r requirements.txt
  - pip install -e .
  - git clone https://github.com/COMBAT-TB/combat-tb-neodb.git && cd combat-tb-neodb/
  - docker-compose up --build -d db && cd ..
  - docker ps
  - sleep 30

script:
  - travis_wait 30 pytest -v test/

after_success:
  - test $TRAVIS_BRANCH = "master" && bash conda/conda_upload.sh

deploy:
  provider: pypi
  user: __token__
  password: $PYPI_UPLOAD_TOKEN
  server: https://test.pypi.org/legacy/
  # distributions: "sdist bdist_wheel"
  distributions: "sdist release"
  skip_existing: true
  on:
    branch: master
    condition: $TRAVIS_PYTHON_VERSION = "3.7"