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Release v1.0.0 #1029

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merged 7 commits into from
Aug 20, 2024
Merged

Release v1.0.0 #1029

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3b66c23
Main (#1026)
jtyoung84 Aug 20, 2024
5385622
BREAKING CHANGE: updates schemas to v1.0 (#1028)
jtyoung84 Aug 20, 2024
ddf272a
bump schema version [skip actions]
github-actions[bot] Aug 20, 2024
446d6c0
Merge branch 'main' of github.com:AllenNeuralDynamics/aind-data-schem…
jtyoung84 Aug 20, 2024
debf76c
Merge branch 'release-v1.0.0' of github.com:AllenNeuralDynamics/aind-…
jtyoung84 Aug 20, 2024
9ca3293
build: increments version to 1.0.0
jtyoung84 Aug 20, 2024
aef46a8
build: sets core metadata schema to v1.0.0
jtyoung84 Aug 20, 2024
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2 changes: 1 addition & 1 deletion examples/aibs_smartspim_instrument.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/instrument.py",
"schema_version": "0.10.29",
"schema_version": "1.0.0",
"instrument_id": "440_SmartSPIM2_20231004",
"modification_date": "2023-10-04",
"instrument_type": "SmartSPIM",
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2 changes: 1 addition & 1 deletion examples/aibs_smartspim_procedures.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py",
"schema_version": "0.13.15",
"schema_version": "1.0.0",
"subject_id": "651286",
"subject_procedures": [
{
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2 changes: 1 addition & 1 deletion examples/aind_smartspim_instrument.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/instrument.py",
"schema_version": "0.10.29",
"schema_version": "1.0.0",
"instrument_id": "440_SmartSPIM1_20231004",
"modification_date": "2023-10-04",
"instrument_type": "SmartSPIM",
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2 changes: 1 addition & 1 deletion examples/bergamo_ophys_session.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/session.py",
"schema_version": "0.3.5",
"schema_version": "1.0.0",
"protocol_id": [],
"experimenter_full_name": [
"John Doe"
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2 changes: 1 addition & 1 deletion examples/data_description.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/data_description.py",
"schema_version": "0.13.12",
"schema_version": "1.0.0",
"license": "CC-BY-4.0",
"platform": {
"name": "Electrophysiology platform",
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2 changes: 1 addition & 1 deletion examples/ephys_rig.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/rig.py",
"schema_version": "0.5.5",
"schema_version": "1.0.0",
"rig_id": "323_EPHYS1_20231003",
"modification_date": "2023-10-03",
"mouse_platform": {
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2 changes: 1 addition & 1 deletion examples/ephys_session.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/session.py",
"schema_version": "0.3.5",
"schema_version": "1.0.0",
"protocol_id": [],
"experimenter_full_name": [
"Max Quibble",
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2 changes: 1 addition & 1 deletion examples/exaspim_acquisition.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/acquisition.py",
"schema_version": "0.6.21",
"schema_version": "1.0.0",
"protocol_id": [],
"experimenter_full_name": [
"###"
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2 changes: 1 addition & 1 deletion examples/exaspim_instrument.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/instrument.py",
"schema_version": "0.10.29",
"schema_version": "1.0.0",
"instrument_id": "440_exaSPIM1-20231004",
"modification_date": "2023-10-04",
"instrument_type": "exaSPIM",
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2 changes: 1 addition & 1 deletion examples/fip_behavior_rig.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/rig.py",
"schema_version": "0.5.5",
"schema_version": "1.0.0",
"rig_id": "447_FIP-Behavior_20000101",
"modification_date": "2000-01-01",
"mouse_platform": {
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2 changes: 1 addition & 1 deletion examples/fip_ophys_rig.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/rig.py",
"schema_version": "0.5.5",
"schema_version": "1.0.0",
"rig_id": "428_FIP1_20231003",
"modification_date": "2023-10-03",
"mouse_platform": {
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2 changes: 1 addition & 1 deletion examples/mri_session.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/session.py",
"schema_version": "0.3.5",
"schema_version": "1.0.0",
"protocol_id": [
"dx.doi.org/10.57824/protocols.io.bh7kl4n6"
],
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2 changes: 1 addition & 1 deletion examples/multiplane_ophys_session.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/session.py",
"schema_version": "0.3.5",
"schema_version": "1.0.0",
"protocol_id": [],
"experimenter_full_name": [
"John Doe"
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2 changes: 1 addition & 1 deletion examples/ophys_procedures.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py",
"schema_version": "0.13.15",
"schema_version": "1.0.0",
"subject_id": "625100",
"subject_procedures": [
{
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2 changes: 1 addition & 1 deletion examples/ophys_session.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/session.py",
"schema_version": "0.3.5",
"schema_version": "1.0.0",
"protocol_id": [],
"experimenter_full_name": [
"John Doe"
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2 changes: 1 addition & 1 deletion examples/procedures.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/procedures.py",
"schema_version": "0.13.15",
"schema_version": "1.0.0",
"subject_id": "625100",
"subject_procedures": [
{
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2 changes: 1 addition & 1 deletion examples/processing.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/processing.py",
"schema_version": "0.4.9",
"schema_version": "1.0.0",
"processing_pipeline": {
"data_processes": [
{
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2 changes: 1 addition & 1 deletion examples/quality_control.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/quality_metrics.py",
"schema_version": "0.0.1",
"schema_version": "1.0.0",
"overall_status": "Pass",
"overall_status_date": "2022-11-22",
"evaluations": [
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2 changes: 1 addition & 1 deletion examples/subject.json
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{
"describedBy": "https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/subject.py",
"schema_version": "0.5.10",
"schema_version": "1.0.0",
"subject_id": "12345",
"sex": "Male",
"date_of_birth": "2022-11-22",
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6 changes: 3 additions & 3 deletions schemas/acquisition_schema.json
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Expand Up @@ -5144,10 +5144,10 @@
"type": "string"
},
"schema_version": {
"const": "0.6.21",
"default": "0.6.21",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.6.21"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
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6 changes: 3 additions & 3 deletions schemas/data_description_schema.json
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Expand Up @@ -1775,10 +1775,10 @@
"type": "string"
},
"schema_version": {
"const": "0.13.12",
"default": "0.13.12",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.13.12"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
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6 changes: 3 additions & 3 deletions schemas/instrument_schema.json
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Expand Up @@ -9451,10 +9451,10 @@
"type": "string"
},
"schema_version": {
"const": "0.10.29",
"default": "0.10.29",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.10.29"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
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60 changes: 30 additions & 30 deletions schemas/metadata_schema.json
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Expand Up @@ -558,10 +558,10 @@
"type": "string"
},
"schema_version": {
"const": "0.6.21",
"default": "0.6.21",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.6.21"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
Expand Down Expand Up @@ -4872,10 +4872,10 @@
"type": "string"
},
"schema_version": {
"const": "0.13.12",
"default": "0.13.12",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.13.12"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
Expand Down Expand Up @@ -13176,10 +13176,10 @@
"type": "string"
},
"schema_version": {
"const": "0.10.29",
"default": "0.10.29",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.10.29"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
Expand Down Expand Up @@ -24205,10 +24205,10 @@
"type": "string"
},
"schema_version": {
"const": "0.13.15",
"default": "0.13.15",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.13.15"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
Expand Down Expand Up @@ -24329,10 +24329,10 @@
"type": "string"
},
"schema_version": {
"const": "0.4.9",
"default": "0.4.9",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.4.9"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
Expand Down Expand Up @@ -24711,10 +24711,10 @@
"type": "string"
},
"schema_version": {
"const": "0.0.1",
"default": "0.0.1",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.0.1"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
Expand Down Expand Up @@ -26606,10 +26606,10 @@
"type": "string"
},
"schema_version": {
"const": "0.5.5",
"default": "0.5.5",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.5.5"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
Expand Down Expand Up @@ -28742,10 +28742,10 @@
"type": "string"
},
"schema_version": {
"const": "0.3.5",
"default": "0.3.5",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.3.5"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
Expand Down Expand Up @@ -30998,10 +30998,10 @@
"type": "string"
},
"schema_version": {
"const": "0.5.10",
"default": "0.5.10",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.5.10"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
Expand Down Expand Up @@ -34383,10 +34383,10 @@
"type": "string"
},
"schema_version": {
"const": "0.2.33",
"default": "0.2.33",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.2.33"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
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6 changes: 3 additions & 3 deletions schemas/procedures_schema.json
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Expand Up @@ -11385,10 +11385,10 @@
"type": "string"
},
"schema_version": {
"const": "0.13.15",
"default": "0.13.15",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.13.15"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
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6 changes: 3 additions & 3 deletions schemas/processing_schema.json
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Expand Up @@ -332,10 +332,10 @@
"type": "string"
},
"schema_version": {
"const": "0.4.9",
"default": "0.4.9",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.4.9"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
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6 changes: 3 additions & 3 deletions schemas/quality_control_schema.json
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Expand Up @@ -500,10 +500,10 @@
"type": "string"
},
"schema_version": {
"const": "0.0.1",
"default": "0.0.1",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.0.1"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
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6 changes: 3 additions & 3 deletions schemas/rig_schema.json
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Expand Up @@ -18348,10 +18348,10 @@
"type": "string"
},
"schema_version": {
"const": "0.5.5",
"default": "0.5.5",
"const": "1.0.0",
"default": "1.0.0",
"enum": [
"0.5.5"
"1.0.0"
],
"title": "Schema Version",
"type": "string"
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