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Is your feature request related to a problem? Please describe.
We want "Atlas" as a concept to be agnostic to which atlas people are using, so that people outside AIND can use the data schema for their purposes. Atlas information should still get embedded in the metadata.
Describe the solution you'd like
CCF is no longer a default, but an option
AtlasSpace is some kind of metadata class, probably inherited from BrainGlobe
AtlasTransform information is included, when available
Insertions/SurgeryCoordinates reference the atlas space and reference coordinate. Maybe refactor to AtlasCoordinate and AtlasInsertion generic classes
Is your feature request related to a problem? Please describe.
We want "Atlas" as a concept to be agnostic to which atlas people are using, so that people outside AIND can use the data schema for their purposes. Atlas information should still get embedded in the metadata.
Describe the solution you'd like
AtlasCoordinate
andAtlasInsertion
generic classesAdditional context
Some additional discussion happening here:
https://alleninstitute.sharepoint.com/:w:/r/sites/NeuralDynamics/_layouts/15/Doc.aspx?sourcedoc=%7BE27B889D-27A1-4CC0-948C-10ADBE605654%7D&file=Data+Schema+2.0.docx&action=default&mobileredirect=true&DefaultItemOpen=1
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