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wildrtrax 1.3.1

Major changes

  • Upgraded authorization and API requests to httr2
  • Removed lubridate, curl and intrval as dependencies

Minor changes

  • Address camera functionalities from #60, #62
  • Add GRTS grid cells for Alaska and contiguous United States for wt_add_grts() (#64)
  • Use .wt_col_types() to dynamically adjust column reports to help address (#55)
  • Moved wt_calculate_prf() to internal function

wildrtrax 1.3.0

Major changes

  • Addition of five new functions:
    • wt_dd_summary() for querying data from Data Discover. See APIs for more information
    • wt_evaluate_classifier(), wt_get_threshold(), and wt_additional_species() for wrangling acoustic automated classification results. See Acoustic classifiers for more information.
    • wt_add_grts() to intersect locations with GRTS IDs from NABat
  • wt_download_tags() now becomes wt_download_media() to support broader media downloads in batch from WildTrax
  • Deprecated wt_report()

Minor changes

  • Switch to curl::curl_download() for media and assets
  • Removed dependencies pipeR, progressr, jsonlite, future, furrr, tools, magrittr, markdown, rmarkdown to increase package stability but reduces speed for functions such as wt_audio_scanner(), wt_run_ap(). Moved vembedr to suggests for vignettes
  • Switched wt_download_report() to POST requests
  • Lowercase package name

wildrtrax 1.2.0

Major changes

  • wt_chop() now recurses across all input files
  • Moving geospatial assets to new repository to lighten package size. Asset requests are now made only through usage of wt_qpad_offsets().

Minor changes

  • Improvements to APIs and acoustic convenience functions to resolve issues and PRs
  • Improvements to test suite, testing dependencies, code coverage
  • Addition of Camera data wrangling vignette and additional tutorials

wildrtrax 1.1.0

Major changes

  • wildrtrax now honours new WildTrax report structures. Future changes will incorporate standardized naming in syncing functions.
  • Replaced geospatial functionalities from rgdal, rgeos and maptools with sf, sp and terra packages. Added functionality with the suntools package. Users should re-download the package by October 2023 in-line with the former package retirement: https://geocompx.org/post/2023/rgdal-retirement/.

Minor changes

  • Tweaks to Acoustic data wrangling for (#16)
  • Addition of geospatial assets. Users should be warned package size is now ~40 MB.
  • Moved TMTT predictions from csv to .RDS file.
  • Work flow repairs to wt_get_species() and wt_tidy_species() (#21)
  • Replaced utils::read.csv() to readr::read_csv() in wt_download_report() (#20)

wildrtrax 1.0.1

wildrtrax 1.0.0

Major changes

  • Improvements to wt_audio_scanner()
    • Addition of flac as file type
    • Addition of extra_cols argument to enable faster scanning when argument is set to FALSE. This also deals with headerless file errors for (#2)
    • Enabled parallel file scanning; microbenchmarked base scanning at 5.6x faster on a dual-core machine
    • Moved progress bars to the progressr package
  • Addition of wt_glean_ap() function to acoustic pre-processing work flow to extract desired data from a wt_run_ap() output
  • Addition of linking functions in order to add desired media and metadata to WildTrax: wt_make_aru_tasks(), wt_kaleidoscope_tags() and wt_songscope_tags()
  • Addition of convenience functions: wt_location_distances() and wt_chop()
  • Alignment of wt_download_report() with column headers released in WildTrax Phase 8 to resolve (#3, #4, #5)
  • Addition of additional acoustic functions to prepare data for analysis: wt_replace_tmtt(), wt_make_wide(), wt_format_occupancy(), wt_qpad_offsets()
  • Addition of wt_get_species() to download the WildTrax species table and wt_tidy_species() to filter various taxa
  • Addition of wt_download_tags() to download images, spectrograms and audio clips from tags
  • Experimental testing of customizable, automated reports with wt_report()
  • Long-form documentation available for full-cycle environmental work flows and new articles for usage of acoustic and camera data analysis functions

Minor improvements and bug fixes

  • Moved wt_run_ap() to furrr::future_map from dopar loop to lessen package dependencies
  • Quiet console output from wt_run_ap() for Windows users
  • Added a NEWS.md file to track changes to the package
  • Renamed wt_ind_det to wt_ind_detect()

Deprecated

  • wt_prob_det()

wildrtrax 0.1.0

  • Addition of base functions:
    • Acoustic
      • wt_audio_scanner(), wt_run_ap(), wt_signal_level(), wt_prob_det()
    • Camera
      • wt_ind_det, wt_summarise_cam()
    • Authorization and Download from WildTrax
      • wt_auth(), wt_get_download_summary(), wt_download_report()